Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGAR-PGTTTEESAELKRLRRDNAELRRANAILKTASAFFA-AELDRPAR-
2RN7 Chain:A ((1-108))
--MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCT-PETLRVWVRQHERDTGGDDGGLTTAERQRLKEPERENRELRRSNDILRLASAYFAKAEFDRLWKK
General information:
TITO was launched using:
RESULT:
Template:
2RN7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28179 for 471 contacts (-59.8/contact) +
2D Compatibility (PS) -11401 + (NN) -4445 + (LL) 236
1D Compatibility (HY) -6400 + (ID) 2600
Total energy: -52789.0 ( -112.08 by residue)
QMean score : 0.758
(partial model without unconserved sides chains):
PDB file :
Tito_2RN7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RN7-query.scw
PDB file :
Tito_Scwrl_2RN7.pdb
: