Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVRAVFRRTVGAQWPILLVGSIFAVGFVLAGANFWRRGALLIGIGVGVAAVLRLVLSEERAGLLVVRSKGIDFVTTVTVAAAMVYIASTIDPLGTG
1Z65 Chain:A ((1-30))
----------------------------------------MKNRLGTWWVAILCMLLASHLS---TVKARGIK------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Z65.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3524 for 112 contacts (-31.5/contact) +
2D Compatibility (PS) -2988 + (NN) 60 + (LL) 5828
1D Compatibility (HY) -2400 + (ID) 350
Total energy: -3374.0 ( -30.12 by residue)
QMean score : -0.008
(partial model without unconserved sides chains):
PDB file :
Tito_1Z65.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z65-query.scw
PDB file :
Tito_Scwrl_1Z65.pdb
: