Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDVRASGLLPRWEQTQRFIGEMRGT
1PM7 Chain:B ((1-199))
MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDVRASGLLPRWEQTQRFIGEM---
General information:
TITO was launched using:
RESULT:
Template:
1PM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104401 for 1599 contacts (-65.3/contact) +
2D Compatibility (PS) -21303 + (NN) -9693 + (LL) -20
1D Compatibility (HY) -27200 + (ID) 9950
Total energy: -172567.0 ( -107.92 by residue)
QMean score : 0.876
(partial model without unconserved sides chains):
PDB file :
Tito_1PM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PM7-query.scw
PDB file :
Tito_Scwrl_1PM7.pdb
: