Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVREAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG
2XWN Chain:B ((5-230))
----AGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVH-
General information:
TITO was launched using:
RESULT:
Template:
2XWN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -163895 for 1843 contacts (-88.9/contact) +
2D Compatibility (PS) -25357 + (NN) -17341 + (LL) 432
1D Compatibility (HY) -30800 + (ID) 11250
Total energy: -248211.0 ( -134.68 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_2XWN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XWN-query.scw
PDB file :
Tito_Scwrl_2XWN.pdb
: