Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPALVVGPAAWHAVHVTQSSSAITPGQTAELYPGDIKSVLLTAEQIQARIAELGEQIGNDYRELSATTGQDLLLITVLKGAVLFVTDLARAIPVPTQFEFMAVSSYGSSTSSSGVVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAVHANVEIAYVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVYQ
4RHX Chain:D ((17-200))
-------------------------------LYPGDIKSVLLTAEQIQARIAELGEQIGNDYRELSATTGQDLLLITVLKGAVLFVTDLARAIPVPTQFEFMAVSS----------VRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAVHANVEIAYVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVY-
General information:
TITO was launched using:
RESULT:
Template:
4RHX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -152562 for 1365 contacts (-111.8/contact) +
2D Compatibility (PS) -18602 + (NN) -3965 + (LL) 2140
1D Compatibility (HY) -28000 + (ID) 8700
Total energy: -209689.0 ( -153.62 by residue)
QMean score : 0.642
(partial model without unconserved sides chains):
PDB file :
Tito_4RHX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RHX-query.scw
PDB file :
Tito_Scwrl_4RHX.pdb
: