Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVYTGSDAGDHASAPQPSGSGSVPASVNVPGLVVAAVWAVGLVAGLVALTIGHLAVAAAALVVAVMAPWCRVAYIAHGQHRVCGETLRGTPAGETASFPTGWRGLRFSTR |
1FME Chain:A ((1-28)) | ---------------------------------------------------------------------------EQYTAKYKGRTFRN--EKELRDFIEKFKGR----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FME.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2247 for 132 contacts (-17.0/contact) +
2D Compatibility (PS) -2970 + (NN) 471 + (LL) 5964
1D Compatibility (HY) -800 + (ID) 300
Total energy: 118.0 ( 0.89 by residue)
QMean score : -0.060
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