Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAYDVARVRGLHPSLGDGWVHFDAPAGMLIPDSVATTVSTAFRRSGASTV-GAHPSARRSAAVLDAAREAVADLVNAD-PGGVVLGADRAVLLSLLAEASSS-RAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISKSTRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAWGGPP-IGAMVFRDPSVMNSFGSVSTNPY------------ATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIPVVSFAVHKVPADRVVQRLADNGILAIANT--GSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASLG |
| 4LW2 Chain:A ((6-398)) | -VFNPAQFRAQFPALQDAGVYLDSAATALKPEAVVEATQQFYSLSAGNVHRSQFAEAQRLTARYEAAREKVAQLLNAPDDKTIVWTRGTTESINMVAQCYARPRLQPGDEIIVSVAEHHANLVPWLMVAQQTGAKVVKLPLNA-QRLPDVDLLPELITPRSRILALGQMSNVTGGCPDLARAITFAHSAGMVVMVDGAQGAVHFPADVQQLDIDFYAFSGHKLYGPTGIGVLYGKSE-LLEAMSPWLGGGKMVHEVSFDGFTTQSAPWKLEAGTPNVAGVIGLSAALEWLADYD--------------INQAESWSRSLATLAEDALAKRPGFRSFRC--QDSSLLAFDFAGVHHSDMVTLLAEYGIALRAGQHCAQPLLAELG---VTGTLRASFAPYNTKSDVDALVNAVDRA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LW2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -294265 for 3314 contacts (-88.8/contact) +
2D Compatibility (PS) -41609 + (NN) -24704 + (LL) 1120
1D Compatibility (HY) -15600 + (ID) 4950
Total energy: -380008.0 ( -114.67 by residue)
QMean score : 0.567
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