Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAISFRPTADLVDDIGPDVRSCDLQFRQFGGRSQFAGPISTVRCFQDNALLKSVLSQPSAGGVLVIDGAGSLHTALVGDVIAELARSTGWTGLIVHGAVRDAAALRGIDIGIKALGTNPRKSTKTGAGERDVEITLGGVTFVPGDIAYSDDDGIIVV
1J3L Chain:A ((1-153))
---MEARTTDLSDLYP-EGEALPMVFKSFGGRARFAGRVRTLRVFEDNALVRKVLEEEGAGQVLFVDGGGSLRTALLGGNLARRAWEKGWAGVVVHGAVRDTEELREVPIGLLALAATPKKSAKEGKGEVDVPLKVLGVEVLPGSFLLADEDGLLLL
General information:
TITO was launched using:
RESULT:
Template:
1J3L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105521 for 1334 contacts (-79.1/contact) +
2D Compatibility (PS) -17392 + (NN) -13584 + (LL) 416
1D Compatibility (HY) -16000 + (ID) 3400
Total energy: -155481.0 ( -116.55 by residue)
QMean score : 0.776
(partial model without unconserved sides chains):
PDB file :
Tito_1J3L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J3L-query.scw
PDB file :
Tito_Scwrl_1J3L.pdb
: