Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAPHKVAFPARCAVNICYDKHLCSQVFPA-----GIPVEGFFEGMVELFDADLKRKGFDGVALPAGSYELHKINGVRLDI-NKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH |
| 1WXV Chain:A ((4-87)) | --------GSSGLTVTVTHSNEKHDLHVTSQQGSSEPVVQDLAQVVEEVIGV------------PQSFQKLI-FKGKSLKEMETPLSALGIQDGCRVMLIGKKNS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WXV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74447 for 545 contacts (-136.6/contact) +
2D Compatibility (PS) -8610 + (NN) -1469 + (LL) 38100
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -49526.0 ( -90.87 by residue)
QMean score : 0.654
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