Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQTTPAVRTFQDLILALQNYWAEQGCVVLQPYDMEVGAGTFHTATFLRAIGPETWNAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVL---KPNPENFQELYLGSLKAIGIDPLVHDIRFVED--NWESPTLGAWGLGWEIWLNG----MEVTQFTYFQ-QVG-GIECY--PVTGEITYGLERLAMYLQGVDSVYDLVWTDGPFGKVTYGDVFHQNEVEQSTFNFEHANVPKLFELFDFYESEANRLIALELPLPTYEMVLKASHTFNLLDARRAISVTERQRYILRVRTLARAVAQSYLQARARLGFPMATPELRDEVLAKLKEAE |
| 3L4G Chain:A ((344-481)) | ---------------------------------------------------PFTPVKYFSIDRVFRNETLD----ATHLAEFHQIEGVVADHGLTLGHLMGVLREFFTKLGIT----QLRFKPAYNPYTEP-----SMEVFSYHQGLKKWVEVGNSGVFRPEMLLPMGLPENVSVIAWGLSLERPTMIKYGINNIRELVGHK------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3L4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -50076 for 777 contacts (-64.4/contact) +
2D Compatibility (PS) -13536 + (NN) -2439 + (LL) 15740
1D Compatibility (HY) -8400 + (ID) 1000
Total energy: -59711.0 ( -76.85 by residue)
QMean score : 0.311
|
|
|