Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------------------------------------------------------------------------------MDNQRQYPRTPLKCRIRISHPLFGELMAQTRDLSDTGVYVKHPDLTQLPTGSVVTGQVQDL------PIDAPILQMEVVRVDAEGVGLRFLSEA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
3WFS Chain:C ((23-388)) | LNFYLSYFDDVAKVLPREHYCFIVGGWVRDRILGEPVGYNIDVDFLTTADPVELAKNFAKRIGGHFFVFEPTIASVVLHLPPYRYRFDFSPLKGK-DLEKALIEDL--KERDFTANAIAVNLDDVLTIVYDP--TGGIKDLEQGLLRPVSIENLKRDPVRVLR---GFRIAIEKNLQLTEDFYEFVKEDPRIVLKSAVERITHELFKIMKEKTAHKVIRELYEYGVLEAIIPEIGRLREVKDPLDEHTLKTLEYLEQVIEDRAKYLSAELLENFGKKRVLGEFTDVELLKWGALFHDIGKPQTTFYEHDKVGAQIVREIGERLRWGDEATEFVAKLVRHHLRPFFLREAFKKGELKRRGMANFWRECGDIAPHLFLLSIADAMASGDEEEDIKALMETIAELESFNRNEMK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 24380 for 452 contacts (53.9/contact) +
2D Compatibility (PS) -7578 + (NN) 3829 + (LL) 1064
1D Compatibility (HY) 4000 + (ID) 250
Total energy: 25445.0 ( 56.29 by residue)
QMean score : -0.068
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