Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHRLLSDRARGWRRALCGIVLGLLAWSAHGVPAKAPQDLRIDGEVLPGRSIDLLEQALSRVKFNTDPQQLRRGLVENRLLARAVEDQLTAQSRADLDASVEIEAGNLLEQVYGRRYREDLGPYLRQPRALSAERLREVLAPRSRGLVENSLLLDETQRREAAGVELIGWQFPGQPAQVLDLLSLYEGDNVQGQVELQQGNLAYLARQVQTRIRRDYLWYRLARDGFG--PAERQ-GVRTLVRD----KLVRHRYLHQIGLYSDFHHES-----------DA-LRELAGKVSDKDAEAYYRRNLERYRNVAQVQAAHIRLADQA------------------------------------------------------------------------------------------------------------------------SADKVYAELRGG-LAFDEAVRRYSLADDRDRDPPGDLGLIRPQDGRLDLLRKTALIQKADTVSQPMRIDGAFEIVRVRSREDRQLPLDDRSVRFEVNQAVAREQLAAQFETRLRNLLAGARVEGL |
| 1M5Y Chain:A ((25-426)) | --------------------------------------------------------------------------------------------------------------------------------------------VDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQ---QLP------------------DDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVR-RRITILPQEVESLAQQV-------TELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDP-GSANQGGDLGWATPDIFDPAF-RDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVD----------RAYRMLMNRKFSEEAASWMQEQRASAYVKIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8675 for 1360 contacts (-6.4/contact) +
2D Compatibility (PS) -27283 + (NN) -16965 + (LL) 13604
1D Compatibility (HY) -2800 + (ID) 1550
Total energy: -43669.0 ( -32.11 by residue)
QMean score : 0.281
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