Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWTRLLPFLAWLPGLHRGMLGREAWVGLNGAILALPQSMAYALIAGLPAEYGLYAAMLPVAIACLWGSSRYLVSGPTAAISVLLFSSVAPLAPLGSPQYVQAVLLLTFLAGAFQWLLGVLRVGSLVNFVSHSVMLGFTLGAALLIV-LGQLPYLLGLAASGEGAAPGNGWRLLARFAEFDGPSLLVGGFSFALSLLV-----RRLRPRWPALLLGLLGGATLVW---ALPGTFASVAHVQALSSALPGWSPLVFDSRSILDLLPAAVACGMLGLVTSLSIARALAARQGDAFDANQEVRAQGLSNLLGPWLSASL---SAGSFTRSGLNLEAGARSPLAGAFSALWVALLAVLGARLIEHVPLPAMAAGILLIAWGLIDRPALRALYRSGRAECLVAGLTALATLLLPLQNAIYAGVLASLVFYLRRTSTPRVLRQRNDEEEVLRIEGSIFFGACDYLQRLMRQ--CDRPRLVLDARQVNFIDFAGAVLLQQEARRLHAEGRRLVLRHARPQVREALGRQADEGCRLHYEG |
| 3IF5 Chain:A ((1-448)) | MRH------------------------------PIPDYLASLVTELGAVNPGETAQYIPVLA-----------EADPDRFGIALATPTGRLHCAGDAD---------------------------VEFTIQSASKPFTYAAALVDRGFAAVDRQVGLNPSGE---AFNELSLEAESHRPDNA-MINAGALAVHQLLVGPEASRKERLDRAVEIMSLLAGRRLSVDWETYESEMAVSDRNLSLAHMLRSYGVLQDSAEEIVAGYVAQCAV-LVTVKDLAVMGACLATGGIHPMTGERMLPSIVARRVVSVMTSSGMYDAAGQWLADVGIP----AKSGVAG-------GVLGALPGR-----------VGIGVFS------PRLDEVGNSARGVLACRRLSEDFRLHLMDGD--------------SLGGTAVRFVEREGDRVFLHLQGVIRFGGAEAVLDALTDLRTGIRTVVLNLARVDRIDDVGRRLIAEGVRRLQADGVRVEVEDPERIL------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3IF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -330204 for 3386 contacts (-97.5/contact) +
2D Compatibility (PS) -39435 + (NN) -8920 + (LL) 11168
1D Compatibility (HY) -13600 + (ID) 4200
Total energy: -385191.0 ( -113.76 by residue)
QMean score : 0.265
|
|
|