Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNRLPTCLLAATLFLGSASLYAEDPACARVRLADPGWSDIAVTNATAAFLLESLGYQVKIDTLSVPIIYGGLRDGQVDAFLGGWMPAHQDYHDKFVASGQVERLGRNLDGTRFTLAVPRYVWDAGVHRFEDLAAQGQRFNRKLYGIGSGAPANQSIQKMIDANQFGLGDWKLVESSEQAMLAELGRAEKRQRWLVFLGWTPHPMNIRHDLRYLEGGEQYFGDRGQVYTLARKGYAAQCPNPARLLANLRFDLDMENRLMSDALEGTATPASATRAWLKANPRVLEAWLQGVTSRDGGDALAAVRGQP |
2B4L Chain:A ((8-163)) | ----------------------------------------------------------------------------------------------------------------------------------------EQVNKTIIGIDPGSGIMSLTDKAM--KDYDLNDWTLISASSAAMTATLKKSYDRKKPIIITGWTPHWMFSRYKLKYLDDPKQSYGSAEEIHTITRKGFSKEQPNAAKLLSQFKWTQDEMGEIMIKVE-EGEKPAKVAAEYVNKHKDQIAEWTKGVQKVKGDKINLAYVAWD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B4L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52951 for 947 contacts (-55.9/contact) +
2D Compatibility (PS) -17333 + (NN) -9565 + (LL) 8960
1D Compatibility (HY) -8400 + (ID) 2150
Total energy: -81439.0 ( -86.00 by residue)
QMean score : 0.528
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