Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPVLALRLTALAALVISVSGCVMEAYGSRARSDAQSWIGLPIQDVIKRFGEPERVTGDAARQKYVWKEYENYSHDYDYTYYEQGHGNTPNSSVLNQKTGTANQSGYYTCIYEFFADASGRVVDATARGECR
2KM7 Chain:A ((46-108))
-----------------------------------IRVGMTQQQVAYALGTPLMSDPF-GTNTWFYVFRQQP-----------G----------------H--EGVTQQTLTLTFNSSGVLTNIDNKPALS
General information:
TITO was launched using:
RESULT:
Template:
2KM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15931 for 346 contacts (-46.0/contact) +
2D Compatibility (PS) -6827 + (NN) -2227 + (LL) 3992
1D Compatibility (HY) 0 + (ID) 450
Total energy: -21443.0 ( -61.97 by residue)
QMean score : 0.438
(partial model without unconserved sides chains):
PDB file :
Tito_2KM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KM7-query.scw
PDB file :
Tito_Scwrl_2KM7.pdb
: