Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGY-----------WRQRRAL-----GGRRTAVRAPRGRLLLWCAQARRHPLSRRMESSMTLSLDLLLSLCTALAIGLLIGAERG--WQERDHEDARQIAGIRTFSLAGLLGGFATLLAGELGSAVWVALLLALAALAVAGYVSDVRRGGDQGMTTEIALLMTFLLGSLALTEQRLLAAAGGIVLTLLLSLKDKLHALLKRLTAEELSGTLKLLFISVVLLP-VLPNQGYG-PWAFFNPYLTWWM-VVLIAALGFSAYLAIRLIGSRKGLLLTAVLGGLVSSTVMTLTLAR-LR------ERMPDALLACALLATSALMFPRILVEIGAIHPALLKELALPFAAT-TLVYLGG-TLFHALRGGRASQEAPDEPGLRNPF-ELLPALRFAALLSAILLLVEVGRRL-FGDAGIYAVALLSGLADVDAITLSLARAAQGELDPGVASRGIALAALSNSLVKAGLVVLVGGKRLALQTLPFSLAGLLVGALLILL |
| 4C8H Chain:A ((25-476)) | FRYMPFSPAGTPFGFTDRRYLTMNEVGYVSTVKNSEQYSITVSFFDVGRF---REYHFEDLFGYD----LCFLNEKGTLFGQSKTGQIQYRPHDSIHS--NWTKI---------IPLQAGERITSVAATPVRVIVGTSL-GYFRSFNQFG-----VPFAVEKTSPIVALTAQNYRVFSVHYSQFHGLSYSLSE-----------------LKRYYKRECPLPMSLPNINSDMKKDANLDYYNFNPMG--IKSLFFSSYGDPCIFGSDNTLLLLSKWRSPEESKWLPILDSNMEIWKMSGGKETTDIHVWPLALAYD--TLNCILVKGKHIWP----EFPLPLPSEMEI----RMPVFVKSKLLEENKAILNKEIQIPVSMAAEEEYLRSKVLSELLTDTLENDGEMYGN---ENEVLAALNGAYDKALLRLFASACSDQNVEKALSLAHELKQDRALTAAVKISERAELPSLVKKINNIREARYEQQ----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C8H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -268044 for 2948 contacts (-90.9/contact) +
2D Compatibility (PS) -40839 + (NN) 6047 + (LL) 5564
1D Compatibility (HY) -2800 + (ID) 3750
Total energy: -303822.0 ( -103.06 by residue)
QMean score : 0.112
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