Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKTITWTAALLGSMALAGCSGPKTLYQWEGYQAQVHEYFKGESKEAQAQALEADLEKIRAKNGAVPPGYHAQLGLLYSSIGKDDQMVREFETEKALFPESATYMDFLLNNARGGAR
2FBN Chain:A ((118-162))
---------------------------------------------------------------DKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKE
General information:
TITO was launched using:
RESULT:
Template:
2FBN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8576 for 284 contacts (-30.2/contact) +
2D Compatibility (PS) -4665 + (NN) -1173 + (LL) 4980
1D Compatibility (HY) 800 + (ID) 250
Total energy: -8884.0 ( -31.28 by residue)
QMean score : 0.435
(partial model without unconserved sides chains):
PDB file :
Tito_2FBN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FBN-query.scw
PDB file :
Tito_Scwrl_2FBN.pdb
: