Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDLTLHYLYDPLCGWCYGASPLLAAACEVTGLDVRLHGGGMMTD---ANRQ--PVGAGLRHYVMPHDLRIAQLTGQPFGKDYFDGLLRDTSAVFDSAPPTAAVLAAEAL-DGLGAAMLARIQRAHYVEGRRIAERPVLLELGAELGLG-EGFAEAFDACSGEPLRAHFADSRRLMNRLGAAGFPTFALERDGRLQVLDTGRYLGQPDDWRAFLETQLRLAGGSGAVGGAAAPLCRIDGCA |
| 1R4W Chain:A ((3-220)) | PAPRVLELFYDVLSPYSWLGFEVLCRYQHLWNIKLKLRPALLAGIMKDSGNQPPAMVPHKGQYILKEIPLLKQLFQVPMSVPKD--FF-GEHVKKGTVNAMRFLTAVSMEQPEMLEKVSRELWMRIWSRDEDITESQNILSAAEKAGMATAQAQHLLNKISTELVKSKLRETTGAACKYGAFGLPTTVAHVDGKTYMLF---GSDRMELLAYLLGEKWMGPVPPTL--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120339 for 1711 contacts (-70.3/contact) +
2D Compatibility (PS) -22450 + (NN) -4406 + (LL) 232
1D Compatibility (HY) -6400 + (ID) 1350
Total energy: -154713.0 ( -90.42 by residue)
QMean score : 0.418
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