Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIHSSGGVDMKKTASAVWQGGLKDGKGTLSTESGALKDNPYGFNTRFEGAP-GTNPEELIGAAHAGCFSMALSMMLGEAGLTAERIETRAEVTLDKQ-SDGFAITAVHLVLRARVPGADAQTFEQIANKAKAGCPVSKVLNAKISLDASLDG
2ONF Chain:A ((2-138))
---------MHVYESDVSWIDDRRT---EVS--VGDHR-IEVDSPPEFGGPEGQLYPETLFPSVLASCLLTTFLEFKDRMGINLKSWNSHVTAELGPSPEKGFKFHRIKIHVKIGVNDEDKEKIPRAMQLAEKYCFISRAIRNNVEEIVDYEF
General information:
TITO was launched using:
RESULT:
Template:
2ONF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43656 for 864 contacts (-50.5/contact) +
2D Compatibility (PS) -14344 + (NN) -4723 + (LL) 20
1D Compatibility (HY) -4800 + (ID) 950
Total energy: -68453.0 ( -79.23 by residue)
QMean score : 0.345
(partial model without unconserved sides chains):
PDB file :
Tito_2ONF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ONF-query.scw
PDB file :
Tito_Scwrl_2ONF.pdb
: