Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDVPVLLAAVSPDSPCGDDLEY-DAAFLELERIAQGQPERQMGDAVLPAEPPEWPRVRALASELFGRSKDLRVAN---LLLQSNVALDGLDGLADGLLLVRELLGQYWDGVYPLLDADDDNDPTFRINALTGLVAEPLLQLVWAIPLVRSRAFGPVNLRAALNAAGLQRFASETLSPE--QIAGAFADADADALAATRRALDGAQEHALAIESGVAERVGSAQGLDLGPLRQLLRQALQVFDLYGPQGAGESLAPGAEAVADEQVGAAPVAAVAAPAPRASGEIANREDVLRQLDRLLEYYVRHEPSSPVPVLLKRAKTLVT-ADFAEIVRNLIPDGISQFETLRGPESE |
| 1O9G Chain:A ((2-250)) | --------------SAYRHAVERMDSSDLACGVVLHSAPGY-----------PAFP--VRLATEIFQRALA-RLPGDGPVTLWDPCCGSGYLLTVLGLLHRRS--------LRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGK---PSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALP-----------AHAVIAVTDRS-RKIPVAPV------------------KALER-----------------LKIGTRSAVMVRAADVLEA-------------GP--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O9G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 29261 for 1956 contacts (15.0/contact) +
2D Compatibility (PS) -24144 + (NN) 2135 + (LL) 5948
1D Compatibility (HY) 10800 + (ID) 1150
Total energy: 22850.0 ( 11.68 by residue)
QMean score : 0.071
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