Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVEIHLPGATTALPARLDGVVIGVLLDVPD-AAAPVVAYPGCP-SEHG----LAAATTTQLSRAD-------IGAQVALMFVAGD----------PRQPLLIGRIQRLPQEALAQLDGERLEFSAEREIVLRCGKASITLTRAGKVIIRGAYLSSRSTGVNRIKGGSVQIN |
| 3PQI Chain:A ((24-133)) | ------------------HTSLPVRVIGVDYGSKTVTLESIVKNT-EIDYPTFHDVPFMVNGGGTGRISFPIKAGDIGVVVFS---SSGTLIQPCGLYPACFIPKIATATDSSEEVDSEKVIISNNKQTYASFDPNGNISVYNTQGMKIDMTPNSIVLTDAGGGKLTLQGGT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PQI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38991 for 336 contacts (-116.0/contact) +
2D Compatibility (PS) -7270 + (NN) -3414 + (LL) 1304
1D Compatibility (HY) 0 + (ID) 300
Total energy: -48671.0 ( -144.85 by residue)
QMean score : 0.252
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