Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQALSIVASGMVSAVG-LSAPASCAAIRCALDNFQETRF---IDQGG----------E--WLLAASVPL---EQ---------PWRGRAKLLKMAARAIDEALRGQPDLD----CTELPLLLCVAEGDRPG---------RCAGLDESFLRDLEGELGRRFHPSSALIARGRVGGAVALLNARKLI-QGGCRQVLVAGVDSFVSGPTLAAYEARERLLT-------SQNSNGFIPGEGAAAVLVAAPLH-EE---APQLLCIGLGFGVEKATVESEDLPLRADGLSQAVRAALAEAGCGLEQMDYRLTDISGEQYYFKEASLTLSRNLRVLK---PKFDLWHPADCIGECGAAIGPALLAVALAASRKGYGDG---------------------------------PNVFCHLGNDAGERAAALLSYRRVRAA |
| 2QO3 Chain:A ((5-432)) | -SDPIAIVSMACRLPGGVNTPQRLWELLREGGETLSGFPTDRGWDLARLHHPDPDNPGTSYVDKGGFLDDAAGFDAEFFGVSPREAAAMDPQQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTADVEGYSVTGVAPAVASGRISYTMGLE--GPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALAADGRSKAFGAGADGFGFSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLS--APSGPAQRRVIRQALESCGLEPGDVDAVEAHGTGTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVDWSSGGVALLAGNQPWRRGERTRRAAVSAFGISGTNAHVIVEEAPEHDG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QO3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193275 for 3088 contacts (-62.6/contact) +
2D Compatibility (PS) -35720 + (NN) -9043 + (LL) 484
1D Compatibility (HY) 3600 + (ID) 2400
Total energy: -236354.0 ( -76.54 by residue)
QMean score : 0.436
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