Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKKLSPIFSNITGVVRYQDLAYVASVSDEIQEQNIAHSYVTEWDCGTWCVAGEDDDMLPWEIVSATVVHEPVEQALFLGAR-GQVFCMGSGDIHEE-QLPDGDDAIGGRGNMRGVACI-DGVAYACGMD-RQVYRRFDENDWRAIDTGARPPAGSEAVVGFEAIGGFGAREIYAVGW-DGEIWQYDGK-RWQPRESP-TNLILTAICCAEDGSVYACGQA-GTLLRGRN-DHWEIIAQDDVDEDLWSLAWF-DGALYVSSA--TAVYTLVGG-HLKEVDFGDEQPQRCFHL-SAADGVLWSIAA--KDIFSFDGQQWTRID |
| 2Z2N Chain:A ((24-253)) | -----------------------------------------------------------------------DKGKVWITQHKANMISCINLDGKITEYPLPT------PDAKVMCLTISSDGEVWFTENAANKIGRITKKGIIKEYTLPNP-------DSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITESGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITTSGEITEFKIPTP-NARPHAITAGAGIDLWFTEWGANKIGRLTSNNIIEEY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z2N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159603 for 1668 contacts (-95.7/contact) +
2D Compatibility (PS) -23902 + (NN) -12047 + (LL) 5388
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -195364.0 ( -117.12 by residue)
QMean score : 0.362
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