Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDAHRLSIAAIVDQHAEEAAFLALLRDYAVRAPHYDLEELAELDQRIEAHLDGLAIAGQAGHDALLEQLDAHAQGEAFALAVLAMQAGDDALIGRMRACLAASPEARRGFAAALGWLDW--------DQARPWVERLLASPEPLFRAIGLAACGMHRH---------DPGPALLSALGHADPAVLARAARTAGELRRR--------DLMANIRAYRAHDDPSLRFWANWATAQMGDE--------EALGPLRAFAGQPG-PFQLPATMVLLAWQP---R----DTSMAWIRQLMQAA--DTRRIGIQATGLFGDP--------VAVPWLIQQMRDES--LARVAGEAFSLITGADLALLDLELEALPDYDPGPNDDLDDDNVALDDDENLSWPEAERVSAWWRDNGARFVAGRAYLLGEPLGEARCRQVLRDGQQRQRMAAACLLARFVPNLPLFPTGAPVRRQLDLF |
| 1B3U Chain:A ((339-586)) | --------------------------------------------------------------------------------------------------------HVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDVKYFAQEALTVLSLA------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B3U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89725 for 1415 contacts (-63.4/contact) +
2D Compatibility (PS) -21350 + (NN) -13929 + (LL) 15768
1D Compatibility (HY) -6400 + (ID) 1300
Total energy: -116936.0 ( -82.64 by residue)
QMean score : 0.363
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