Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MG-GFMQYSQRLGEA---GRNDRRSMRGAFRPGL---LPTLVVLGLLPVLLWLGTWQLQRADEKRALLAS-------------YEARRGAEPVSPGQLEGLRD-----PAYVRVRL----HGRFDERHTLLLDNRLRNGQAGVEVLQPF--------------------YDQASGLWLLVNRGWVAWTDRRSPPT----------LETPDRVLLLDAWTYLPPPGG-------------LHLADAPAGGWP------RLVTQLDIPALWQAFGRAGLPWEIRLEPGDASFDTDWPLVSM-----PPERHTGYAVQ-----------WFALATALLALYLYLG---------------VRRAREKNHESRDSDA------ |
| 3ES5 Chain:A ((42-420)) | MRLGWIDPLPQVDTIFPLGLEPNVESIPAGEVELDFNLPETIAKPFADTVTSVGDRIQLVDDDKENIATSIYGLSFFKAARQLYSTMLDHEKAVNQPLKAVYYDETPIPAHMSGALGIIGHMKTKVGDVLVKDAGVLFKRGTAAGVTKFSEIDNDKTWNLDCSKLVWADHSSLSMIKRLASEKISQLVKQRYRVTDAQGHVYSVSMPQLTDQALPDYYDSIPDVAPNSDQLRVLTAALQMSLAQFRNDELPHDEDRSDLLTTLDLLYADGAYEISALRDQFELLMARYTTDFKWRVESIFKVGPPPAGTTGYGAQTVSSTGNTARWQFPLSDADINIGYLFSPSKSFSLFPKMVGYSKRAREDASASFANSDAKKFYAD |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ES5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -47143 for 1513 contacts (-31.2/contact) +
2D Compatibility (PS) -27478 + (NN) -5377 + (LL) 0
1D Compatibility (HY) -4800 + (ID) 2700
Total energy: -87498.0 ( -57.83 by residue)
QMean score : 0.000
|
|
|