Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALQVASAPHGSSEDSTSASLPANYPYHTRMRRNEYEKAKHDLQIELLKVQSWVKETGQRVVVLFEGRDAAGKGGTIKRFMEHLNPRGARIVA-LEKPSSQEQG----------Q------W-------------YFQRYIQHLPTAGEMVFFDRSWYNRAGVERVMGFCSPLQYLEFMRQAPELERMLTNSGILLFKYWFSVSREEQLRRFISRRDDPLKHWKLSPIDIKSLDKWDDYTAAKQAMFFHTDTADAPWTVIKSDDKKRARLNCIRHFLHSLDYPDKDRRIAHEPDPLLVGPASRVIEEDEKVYAEAAAAPGHANLDIPA |
| 3LV8 Chain:A ((26-229)) | ----------------------------------------------------------NAKFIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHPGEELQDITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIA----PS---TMQSLKQTALGDFKPDLTLYLDIDPKLGLER-----ELDRI----E--K-MDISFFERARERYLELANS----DDSVVMIDAAQS---IEQVTADIRRALQDWLSQVN---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46829 for 1272 contacts (-36.8/contact) +
2D Compatibility (PS) -18983 + (NN) -11305 + (LL) 8508
1D Compatibility (HY) -4400 + (ID) 1100
Total energy: -74109.0 ( -58.26 by residue)
QMean score : 0.412
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