Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHRRTQSRMSVLRRLAAVLGLGACALAAEAAEPLKIGFVYVG--PVGDHGWTYQHELGRRELVEHFGDKVKTSFVENVAEGADAERVIRNLA-KDGYGLVFTTSFGYMNPTAKVARQFPKVTFEHATGYKRDRNLGTYLSRSYEGRYVGGFLAAKMTRSHKIGYIASFP-IPEVIRDINAIQLALDKYDPQAELKVMWVSTWFDPGKEADAANALID----QGVDVVFQHTDSPA--PIQAAERRG------VYAVGYASDMQHFGPKTVLTSIVNDWGPHYIRSAQAVMDGTWKSEDFWGGLAESTVVLPLNQEVLPAPVREEAGRLIESIRSGAFHPFTGPIRDQSGKERFAAGVSATKADLASMNYYVEGIKADLPK |
| 3BBL Chain:A ((3-255)) | --------------------------------LSFMIGYSWTQTEPGQVNHILDQFLSSMVREAGAV-N-YFVLPFPFSED-RSQIDIYRDLIRSGNVDGFVLSSINYNDPRVQFLLK-QKFPFVAFGRSNPDWDFAWVDIDGTAGTRQAVEYLIGRG-HRRIAILAWPEDSRVGNDRLQGYLEAMQTAQLPIETGYILRGEG-TFEVGRAMTLHLLDLSPERRPTAIMTLNDTMAIGAMAAARERGLTIGTDLAIIGFDDAPMVQYLFPPLSSVRQPIAEAGRKCIELLVAIVEGREPEQKHILLQPSLIIRASEGHH-------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3BBL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -81122 for 1912 contacts (-42.4/contact) +
2D Compatibility (PS) -26131 + (NN) -10264 + (LL) 6444
1D Compatibility (HY) -3200 + (ID) 1400
Total energy: -115673.0 ( -60.50 by residue)
QMean score : 0.419
|
|
|