Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------MSSLQSPSDASARNDLVYGLDDRPSAPIALLAALQHLLAIIVPIVTPGLLICQALGVSPRDTNLIVSMSLVISGIATFVQCKRFG---PFGAGLLIV------QGTSFNFVGPLIAGGA-----LMVKQ----GTPVESVMAAIFGVVIAGSFVEM---------GISRILPFVKRLI--------------------------TPLVTGIVVLMIG-----LTLIKV--GLISMGGGFSAMSNGTFANGENLLLS----------------GVVLGI-------IVVLNRIPVVWMRSCAI---VIALAVGY-------ALAGYLGRLD------------------FTGMHQAELFQVPTPLH--FGLDFSW-------------PLFIPMLVIYLVTSLEAIGDVTATSKVSKQPVEGPLWMQRIKGGVLVNG-ANSFLAGIFNTFPSSVFAQNNGV-IQLTGVASRYVGLWIAAMLVLLGLFPSVAGVIQAVPEPVLGGAAMVMFGAVAASGINILAGIQLDRRALLIIAVSLALGLGVSQVPEFLAHMPAALRNVLESGVATGGICALLLNWFLPESPVQKAGH |
| 4M1K Chain:A ((6-688)) | EYDLKRLRNIGIAAHIDAGKTTTTERILYYTGRIAAVTTCFWKDHRINIIDTPGHVDFTIEVERSMRVLDGAIVVFDSSQGVEPQSETVWRQAEKYKVPRIAFAN--KMDKTGADLWLVIRTMQERLGARPVVMQLPIGREDTFSGIIDVLRMKAYTYGNDLGTDIREIPIPEEYLDQAREYHEKLVEVAADFDENIMLKYLEGEEPTEEELVAAIRKGTIDLKITPVFLGSALKNKGVQLLLDAVVDYLPSPLDIPPIKGTTPEGEVVEIHPDPNGPLAALAFKIMADPYVGRLTFIRVYSGTLTSGSYVYNTTKGRKERVARLLRMHANHREEVEELKAGDLGAVVGLKETITGDTLVGEDAPRVILESIEVPEPVIDVAIEPKTKADQEKLSQALARLAEEDPTFRVSTHPETGQTIISGMGELHLEIIVDRLKREFKVDANVGKPQVAYRETITKPVDVEGKFIRLTGGRGQYGHVKIKVEPLPRG-SGFEFVNAIVGGVIPKEYIPAVQKGIEEAMQSGPLIGFPVVDIKVTLYDGSYHEVDSSEMAFKIAGSMAIKEAVQKGDPVILEPIMRVEVTTPEEYMGDVIGDLNARRGQILGMEPRGNAQVIRAFVP--LAEMFGYATDLRSKTQGRGSFVMFFDHYQEVPKQVQEKLI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M1K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -362075 for 3292 contacts (-110.0/contact) +
2D Compatibility (PS) -46702 + (NN) 8993 + (LL) 724
1D Compatibility (HY) -17200 + (ID) 4400
Total energy: -420660.0 ( -127.78 by residue)
QMean score : 0.061
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