Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLPAMRTGLLCALLGVTAPAWAEYVTVISFGGANKEAQETAFYKPFKSATGNRVVHGSYNGDLAKLKRMVEISHVSWDVVEVEAPELARGCEEGLFEKLDMAKVGDPADFVPGA--------VQPCGVGIFVWTTLLAYNPGKVAGSPQGWADFWDVKKFPGKRGLRWGAKYSLEFALMADGVAPKDVYQTLATPAGV-ERAFRKLDELKPYI-HWWKSGQDPVRDLADGTVVMSSAYNGRIAAAQA--EKQRLAMVWS--G-GVYDFDFWALPVGVWKKQLAEEFIRFASQPEQQKAFAENIAYGPANRKAVGLLDPQVAANLPTAPQNMQNAVGMNVAFWAEHGEALEQRFQNWAKR |
| 2V84 Chain:A ((25-343)) | ----------------------DVLYLYNWTYY----TPTSLIKKFEQQYNVQVVYDDY-ASNEDMFAKLSIGASGYDLVVPSGDFVSIMKRKHLLEKIDLSKIPNVQFIKESVRARIAYDPKMEYSVPYYLGAAGIAVNKKAVPSYARTWSIFSRKD-LAYRMSMMDDMREVMGAALASLGYNVNTK-----NEQELAQAAILVTDHWKPNLVKFD--SDGYAKSFASGDFVVAHGFAEAFFAETPEAMHEHIDFFIPQDVASPVYVDSFCIPKGARNRDLAHAFINFFLEPAHYAEFLDTFGFPSTIHREAAAYQKK--TPYYS-EHDLERGTLKT--DVGAAIEHYNAHWNAVRFR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V84.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94586 for 2553 contacts (-37.0/contact) +
2D Compatibility (PS) -33126 + (NN) -16703 + (LL) 3652
1D Compatibility (HY) -16800 + (ID) 2150
Total energy: -159713.0 ( -62.56 by residue)
QMean score : 0.382
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