Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIPQTLTNTNLFIDGVSFAGDVPSLTLPKLAVKTEQYRAGGMDAPVSIDMGLEAMEAKFSTNGARREALNFFGLADQSAFNGVFRGSFKGQKGASVPVVATLRGLLKEVDPGDWKAGEKAEFKYAVAVSYYKLEVDGREVYEIDPVNG-VRAINGVDQLAGMRNDLGL |
3B9C Chain:A ((90-137)) | -----------------------------------------------------------------------------------------------------------------FIPDQPFRVEILCEYPRFRVFVDGHQLFDFYHRIQTLSAIDTIKINGDLQITKLG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B9C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5222 for 191 contacts (-27.3/contact) +
2D Compatibility (PS) -4792 + (NN) 1464 + (LL) 6028
1D Compatibility (HY) -4400 + (ID) 250
Total energy: -7172.0 ( -37.55 by residue)
QMean score : 0.360
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