Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDCLFCKIVAGEVPARKFYEDEEVVAFHDIGPQAPVHFLVIPKRHIPTLEHLTEADRPLAGHILFTAQRLAREQGCEEGFRVVMNCNDLGGQTVHHIHMHVLGQRQMHWPPG
1KPE Chain:B ((15-125))
-DTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG
General information:
TITO was launched using:
RESULT:
Template:
1KPE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95809 for 782 contacts (-122.5/contact) +
2D Compatibility (PS) -12408 + (NN) -10158 + (LL) 208
1D Compatibility (HY) -11200 + (ID) 2750
Total energy: -132117.0 ( -168.95 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_1KPE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KPE-query.scw
PDB file :
Tito_Scwrl_1KPE.pdb
: