Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQFFLRY--AYAPLFWSGFIGLATWQVGYRQASHAWLVALFLG---ALGLSFLAERRLPYQPRWN----------RPHADRLRDVLHASVNESLNAL---------GILALPLLAGVLGFWPVWPQAWPLWLQLLLAIVLADLGITLVHYASHRSALLWRLHAVHHSVQRLYGFNGLMKHPL-HLGLEALGGTLPLLLLGVP-QTVAALLAFAIGIQLLLQHSNVDMRIG--GLRHVF------AWAPLHRLHHIRYGRAGDVNFALFFS----VWDRLLGTALHRPD--YRLDSTDMGIGDQPD---YPRDYAGQLLAPFRDLPRSRHVPQ-----PPEGLGRSAGQA----------- |
| 4K7J Chain:A ((26-375)) | -GLLTDYGNASASPWMKKLQSVA-------QGSGETFRILQIGDSHTAGDFFTDSLRKRLQKTWGDGGIGWVYPANVKGQRMAAVRHNGNWQSLTSRNNTGDFPLGGILAHTGSGGSMTLTASDGIASKQRVSLFAKPLLAEQTLTV--NGNTVSANGGGWQVLDTGAALPLTIHTEMPWDIGFINIENPAGGITVSAMGINGAQLTQWSKWRADRMNDLAQTGADLVILSYGTNEAFNNNIDIADTEQKWLDTVRQIRDSLPAAGILIIGAPESLKNTLGVCGTRPVRLTEVQQMQRRVARQGQTMFWSWQNAMGGICSMKNWLNQGWAAKDGVHFSAKGYRRAAEMLADSLEELVRSA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164799 for 2202 contacts (-74.8/contact) +
2D Compatibility (PS) -29488 + (NN) 10140 + (LL) 984
1D Compatibility (HY) -800 + (ID) 2600
Total energy: -186563.0 ( -84.72 by residue)
QMean score : ?
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