Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSELILLHNPRCSKSRAALELLEARGLQPQVVRYLETPPSAAELKAILAKLGIPARQLLRTGEDEYKALGLDEPSLGEEAIIEAMARHPKLIERPVLVAGDKAVVGRPPERVLEILA
3L78 Chain:A ((1-115))
--MVTLFLSPSCTSCRKARAWLNRHDVVFQEHNIMTSPLSRDELLKILSYTENGTEDIISTRSKVFQKLDIDVDELSVSELINLISKNPSLLRRPIIMDNKRMQIGFNEDEIRAFLP
General information:
TITO was launched using:
RESULT:
Template:
3L78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63855 for 834 contacts (-76.6/contact) +
2D Compatibility (PS) -12918 + (NN) -10362 + (LL) 180
1D Compatibility (HY) -8800 + (ID) 1200
Total energy: -96955.0 ( -116.25 by residue)
QMean score : 0.704
(partial model without unconserved sides chains):
PDB file :
Tito_3L78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L78-query.scw
PDB file :
Tito_Scwrl_3L78.pdb
: