Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASPAFMRFLPRCGAAAAFGTLLGLAGCQSWLDDRYADSLPPTSGVQPIKGLAQNVSIRRNALGMPLIETGTFHDALFALGYVHASDRLSQMVSLRLLAQGRLAEMVGPGALEIDRFMRTVNLRQAAEIQYRNASPRLQRFFEVYARGVNAYLYRYRDKLPMDLAQSGYRPEYWKPEDSALVFALLNFGLAVNLQEEIASLTLAQKVGSDKLAWLTPTYPDENLPFDEAEKLKGLRLDGQVPGLAGVEGAARQVAALSMLGVAASNNWAIAPQRSRSGKSLMANDTHLPLSMPSVWNYVQIRSPKYQAAGVSIAGLPGVVAGFNGKLAWGMTMVLGDNQDLYLEQLRRQGNRLYYLADGKWQPTRERQETFFIKGQRPIREVIHETRHGPLLNSALGERKNILQPLPLKSGYGLAYRSIQQEADKTLDGFFDLSRAKTIEQAFDATREIRAMPLNIVFAD-EKHIGWQVTGRYPNRKEG-RGLLPSPGWDGRYDWDGYADPILHPSDQDPQQGWLGTANHRTVQPGYGAQ--LSNSWYYPERAERIAQLAGASKSHDTQSMIRM--QYDQTSLFVAKLQAMFDNPGMALPLRQAIDALPEAQRSRAREAYDRLMAFDGKLTAS-------SSDAALYGAFLHESARQIFLDELGPEDGPAW--KAFV-------ETANLSY--SAQADHLLGRDDSPFW---DDTRTPQKEDKPAILARSLAAAVEFCEQRLGSERKAWQWGKLHTYEWQSDSSKMAPYLGAGERAGLGAIKGYLDRGPYPAGGDHTTLDVSAYGWGQDFDTWLIPAMRLIVDFGQS-EPMIGVNSSGQSGNP-----ASPHYADGIDAWLKGRYVSFPFQPQNLDRVYGNKRLTLTPAR |
| 1CP9 Chain:B ((1-551)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNVWLVGKTKASGAKAILLNGPQFGWFNPAYTYGIGLHGAGFNIVGNTPFAYPAILFGHNGHVSWGSTAGFGDGVDIFAEQVSPE-DPNSYLHQGQWKKMLSRQETLNVKGEQPITFEIYRTVHGNVVKRDKTT----------HTAYSKARAWDGKEL-TSLMAWVKQGQAQNWQQWLDQAQ-NQALTINWYYADKDGNIGYVHTGHYPDRQINHDPRLPVSGT-GEWDWKGIQPFANNPKVYNPKSGYIANWNNSPAK-NYPASDLFAFLWGSADRVKEIDNRIEAYDKLTADDMWAILQQTSRVDLNHRLFTPFLTQ---------ATQGLP--SNDNSVKLVSMLQQWDGINQLSSDGKHYIHPGSAILDIWLKEMLKATLGQTVPAPFDKWYLASGYETTQEGPTGSLNISTGAKLLYESLL-EDKSPISQSIDLF---SGQPQNDVIRKTLNTTYQKMIEKYGDNPANWQTPATALTFRENNFF---------------------GIPQ-ALPQENFHQN--E------Y--HNRGTENDLIVFTEEGVSAWDVVAPGQSGFISPQGKPSPHYQDQLSLYQQFGKKPLWLNSEDVAPY-IESTETLIIER |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CP9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77808 for 4106 contacts (-18.9/contact) +
2D Compatibility (PS) -56177 + (NN) -34526 + (LL) 20712
1D Compatibility (HY) -16000 + (ID) 5400
Total energy: -169199.0 ( -41.21 by residue)
QMean score : 0.410
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