Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRFEIAFSGQLVAGARPEVVKANLAKLFQADAQRIELLFSGRR---VVIKNNLDAASAEKYRSVLERAGAIAVVAEMEVEEVVMAPPPAQTTPVEAPQTRAATGTSAPAGRLQVAPRDGYMAAFAEVDAPDFGLAPVGADLQDAKAEAEAPKLDLSRFSVAPVGSDMGQARSEPAAPAPDTSHLRLQD |
| 1DD3 Chain:A ((58-128)) | --EFDVVLKSF-G-Q-NKIQVIKVVREITGLGLKEAKDLVEKAGSPDAVIKSGVSKEEAEEIKKKLEEAGAEVELK----------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DD3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41035 for 500 contacts (-82.1/contact) +
2D Compatibility (PS) -7556 + (NN) -4252 + (LL) 6960
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -48533.0 ( -97.07 by residue)
QMean score : 0.685
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