Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQGAYLELGSLWLCLSREPQYGGPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEAHVGDLRSRLAACRQAPYAGMRFAD
1LQO Chain:B ((1-134))
MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQGAYLELGSLWLCLSREPQYGGPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEAHVGDLRSRLAACRQAPYAGMRFA-
General information:
TITO was launched using:
RESULT:
Template:
1LQO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67493 for 872 contacts (-77.4/contact) +
2D Compatibility (PS) -14356 + (NN) -6851 + (LL) -76
1D Compatibility (HY) -18000 + (ID) 6700
Total energy: -113476.0 ( -130.13 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_1LQO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LQO-query.scw
PDB file :
Tito_Scwrl_1LQO.pdb
: