Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRILADENIPVVDAFFADQGSIRRLPGRAIDRAALAEVDVLLVRSVTEVSRAALAGSPVRFVGTCTIGTDHLDLDYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAREPDGEFVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWEGEPQADPELAARCLIATPHIAGYSLEGKLRGTAQIYQAYCAWRGIAERVSLQDVLPETWLAGLQLNPGCDPAWALATLCRAVYDPRSDDAAFRRSLTGDSATRRAAFDALRKHYPPRREITGLRVATGGQAELQRVVRALGAQLV |
| 3OET Chain:F ((5-357)) | -KILVDENMPYARELFSRLGEVKAVPG----VEELNHADALMVRSVTKVN-SLLS-TPINFVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAARGDEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVWEGEPDLNVALLEAVDIGTSHIAGYTLEGKARGTTQVFEAYSAFIGR-----LETLLPAPEFGRITLHGPLDQP-TLKRLAHLVYDVRRDDAPLRK-----VAGIPGEFDKLRKNYLERREWSSLYVMCDDETAAALLCKLGFNAVH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OET.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -250669 for 2833 contacts (-88.5/contact) +
2D Compatibility (PS) -36722 + (NN) -16047 + (LL) 1128
1D Compatibility (HY) -30000 + (ID) 8200
Total energy: -340510.0 ( -120.19 by residue)
QMean score : 0.576
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