Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------MMHPRRLLAVLGVVVLT-SMTSCTSFSSSRSSSMDKTGWIT-----HCFGRFLIDLPPDAVI----NAGYYLWGDRIEYLDDKPTELAARVDRLEQEWRTQRHKSKGNMFLRKIDFGNESVGLLSWSSEVASKTYLLDTY--VTSKPTWHVYRWKGKVSVDREQHAVEISRALARNLRSRAPKEIPSEPGFCIDHAYIAGDSFQVERFGVGV----TFPEHPGARFEFRSSTGAELNSL-LERVDGFVQNMLSTFAGMETLRKGKHPVGS---------LPGEEYLVAGSDKGQRGYT---------FMWEVQGKEESL------TEPNLTAGLAVLERSNENGKPPPPAFKSDKEALELWDTIVDSIRVRPTSSSPRGGNAGPSPAPKPATPGG------------QTLGD----------HYVYEEFLSSLKPKDSWLDDL----------------------- |
| 4PE2 Chain:A ((3-498)) | IEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALM---F-NLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDK-PLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQTNAAASNINKAKVASVESDYSSVKSAALSYYSDKNTMPPSGELDALETYMDTLPDKADIGGGYKLLLVNNKLALKIGDGTAADSVTLTKAQIEKLLSDIGPKKIYTENTLKTELQKNSTLKDGTLYIVLIDN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PE2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 27817 for 2828 contacts (9.8/contact) +
2D Compatibility (PS) -38645 + (NN) -6855 + (LL) 64
1D Compatibility (HY) -2000 + (ID) 3650
Total energy: -23269.0 ( -8.23 by residue)
QMean score : 0.114
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