Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLAQFTPSALADLANCVLRIPLALQQPSSVAMTLPSLTSFMPHFGAPALLLLQLLAALPATAAETDATPLRFSVMESWSMPLVRLQRGQPIDGIVYDITRSLARQVGRKALYHPYP-RGRIEQAMNAGEIDVRCYISPAWLSHDFP--GYRWSVALLVQRDILVAREGFA---PIPEALPAQRIGTVLGYSYPRLQALFDIGRLRRDDARTQDLVLEKLRAGRYRYAVSHQLSLHWSNRQAPGQPPLQEAAQLEETAVSCMVRDSAEVPVEAILKTFEEMKRSGEIEEILQRYR |
| 1II5 Chain:A ((2-225)) | -----------------------------------------------------------------SAMALKVGVV--GNPPFVFYG---AFTGISLDVWRAVAESQKWNSEYVRQNSISAGITAVAEGELDILI-GPISVTPERAAIEGITFTQPYFSSGIGLLIPGTATPLFRSVGDLKNKEVAVVRDTTAVDWANF---YQADVRETNNLTAAITLLQKKQVEAVMFDRPALIYYTRQNPNLNLEVTEIRVSLEPYGFVLKEN-SPLQKTINVEMLNLLYSRVIAEFTERWL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1II5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123991 for 1759 contacts (-70.5/contact) +
2D Compatibility (PS) -23144 + (NN) -8536 + (LL) 6336
1D Compatibility (HY) -7200 + (ID) 1450
Total energy: -157985.0 ( -89.82 by residue)
QMean score : 0.451
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