Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLPFATIPATERNSAAQHQDPSPMSQPFDLPALASSLADKSPQDILKAAFEHFGDELWISFSGAEDV-VLVDMAWKL-NRNVKVFSLDTGRLH-PETYRFIDQVREHYGIAIDVLSPDPRLLEPLVKEKGLFSFYRDGHGECCGIRKIEPLKRKLA--GVRAWATGQRRDQSPGTRSQVAVLEIDGAFSTPEKPLYKFNPLSSMTSEEVWGYIRMLELPYNSLHERGYISIGCEPCTRPVLPNQHEREGRWWWEEATHKECGLHAGNLISKA |
| 2DPL Chain:A ((21-199)) | ------------------------------------------------------SKAIIALSGGVDSSTAAVLAHKAIGDRLHAVFVNTGFLRKGEPEFVVKTFRDEFGMNLHYVDAQD-RFFSAL--KGVTD-PEEKRKIIG-RVFIEVFEEVAKKIGAEYLIQGTIAP----------------------LNLKLIEPLRDLYKDEVRELAKFLGLPEKIYNRMPFPGPGLAVRVIGEVTPEKIRIVREANAIVEEEVERAGLRPWQAFA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DPL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65257 for 1135 contacts (-57.5/contact) +
2D Compatibility (PS) -16598 + (NN) -8376 + (LL) 4212
1D Compatibility (HY) -4400 + (ID) 1350
Total energy: -91769.0 ( -80.85 by residue)
QMean score : 0.398
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