Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGRTVEDVDMLNHHFRVCSATVYRPPGDGCQSATSQPSAWWMAAKESRSGQLRRVEHVAFEGHPAAVLAGRAVEDRAVVGEADGQAEADVGSVLRGVQLAFEVQLEHARLDAFQADGDVRVVHGLAF--AAALLGADGEGHGVSVHVLLQLAWGRRRQ-RGGQTTGRRAGWPVLAAV--GAARGLGIIRRRRSPTAHHQPTPEGMMKLPVLAVLGAALLLSACAKKEAEACASPDVKDQLMRIFLQGAITERSPEFKDSALRDVAILEK-DPDSGVLSCVGTLSV-PAGQQVVEGVLQYRIAPVAKSDYDYLLLDTAGAN---TTALAQRLNKALGQ---------------------------------------------- |
4OR2 Chain:A ((5-372)) | --DLEDNWETLNDNLKVIEKA---DNAAQVKDALTKMRAAALDAQKATPPKLED-----KSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAY----IQKYLIPVRYLEWSNIESIIAIAFSCLGILVTLFVTLIFVLYRDTPVVKSSSRELCYIILAGIFLGYVCPFTLIAK---------PTTTSCYLQRLLVGLSSAMCYSALVTKTNRIARILARKPRFMSAWAQVIIASILISVQLTLVVTLIIMEPPMPILSYPSIKEVYLICNTSNLGVVAPLGYNGLLIMSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTCFAVSLSVTVALGCMFTPKMYIIIAKPE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OR2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6311 for 2146 contacts (-2.9/contact) +
2D Compatibility (PS) -32473 + (NN) -11921 + (LL) 1852
1D Compatibility (HY) -14000 + (ID) 2450
Total energy: -65303.0 ( -30.43 by residue)
QMean score : 0.186
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