Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDNAIPQGFEDAVELRRKNRETVVKYMNTKGQDRLRRHELFVEDGCGGLWTTDTGSPIVIRGKDKLAEHAVWSLKCFPDWEWYNIKVFETDDPNHFWVECDGHGKILFPGYPEGYYENHFLHSFELDDGKIKRNREFMNVFQQLRALSIPVPQIKREGIPT
3B4O Chain:B ((37-185))
-------------VAARQHNRKIVEQYMHTRGEARLKRHLLFTEDGVGGLWTTDSGQPIAIRGREKLGEHAVWSLQCFPDWVWTDIQIFETQDPNWFWVECRGEGAIVFPGYPRGQYRNHFLHSFRFENGLIKEQREFMNPCEQFRSLGIEVPEVRRDGLPS
General information:
TITO was launched using:
RESULT:
Template:
3B4O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26820 for 973 contacts (-27.6/contact) +
2D Compatibility (PS) -15758 + (NN) -4944 + (LL) 688
1D Compatibility (HY) -15600 + (ID) 4600
Total energy: -67034.0 ( -68.89 by residue)
QMean score : 0.588
(partial model without unconserved sides chains):
PDB file :
Tito_3B4O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B4O-query.scw
PDB file :
Tito_Scwrl_3B4O.pdb
: