Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTRTSPAPAGLLRPSLHCLAFAVALGSAGAALAKDVTWEDIANDDKTTGDVLQYGMGTHAQRWSPLKQVNADNVFKLTPAWSYSFGDEKQRGQESQAIVSDGVIYVTASY-SRLFALDAK-TGKRLWTYNHRLPDDIRP--CCDVVNRGAAIY--GD----KVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEG-----HMGRLNGKDSTVTGD--VKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVTVGYGGAVPLWGGDMADLTRPVAQGGSFWVFKLPSWDNRTASR |
| 4TQO Chain:H ((23-556)) | ------------------------------------------------------------ATHFSRLTEINSHNVKNLKVAWTLSTG--TLHGHEGAPLVVDGIMYIHTPFPNNVYAVDLNDTRKMLWQYKPKQNPAARAVACCDVVNRGLAYVPAGEHGPAKIFLNQLDGHIVALNAKTGEEIWKMENSDIAMGSTLTGAPFVVKD----KVLV--GSAGAELGVRGYVTAYNIKDGKQEW-RAYATGPDEDLLLDKDFNKDNPHYGQFGLGLSTWEGD---------AWKIGGGTNWGWYAYDPKLDMIYYGSGNPAPWNETMRPG--------DNKWTMTIWGRDADTGRAKFGYQKTPHDEWDYAGVNYMGLSEQEV-DGKLTPLLTHPDRNGLVYTLNRETGALVNAFKIDDTVNWVKKVDLKTGLPI-----RDPEYSTRMDH-NAKGICPSAMGYHNQGIESYDPDKKLFFMGVNHICMDWEPFMLPYRAGQFFVGATLNMYPGPKGMLGQVKAMNAVTGKMEWEVPEKFAVWGGTLATAGDLVFYGTLDGFIKARDTRTGELKWQFQLPSGVIGHPITYQHNGKQYIAIYSGVGGWPGV--GLVFDLKDPTAGLGAVGAFRELAHYTQMGGS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4TQO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -117387 for 4853 contacts (-24.2/contact) +
2D Compatibility (PS) -56296 + (NN) -32735 + (LL) 3352
1D Compatibility (HY) -32000 + (ID) 9800
Total energy: -244866.0 ( -50.46 by residue)
QMean score : 0.541
|
|
|