Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHQRQHFEALAEDLRR--HLAEGEDFTLWYSAEDSEFIRFNRARVRQAGRVRQASALLRLIRDERQASLDLTLSGAPEEDRQRLAEGLRQLRQSLAWIPADPYLLLDTSA-WQR-----ENQDLG-----AAPDSGALLASLERRAR----DLD-LVGIYAAGPLFRGFANSWGAFGWHAGSSFNFDWSLFHGNG-QAVKADYAG---QRWDDEAFARRFEQAREQLGHLGKPLRQLRPGDYRAYLAPAALEEVMQMLCWGGFSARALATGESPLQRLQNGDALLSPLLNLAERPATS---PSPAFSAEGSPRAEVELVGNGRLSGRLVSSRSAREYGLVANGAGANEAPTALDMAGGSLEQARILEALDTGLYIGNLWYLNYSDMPAARLTGMTRFA--TFWVENGQIRAPVSTMRFDDSLYSFLGAHLEDLSHERELRLSSNTYGERQTDSMHLPGALTGRFTLTL |
| 1VPB Chain:A ((15-448)) | ---TDENKKLAQWAMDYALKNGCQAAKVLLYSSSNTSFELRD--MDRLQQASEGGLSLSLYVDGRYGSISTN-----RLNRKELETFIKNGIDSTRYLAKDEARVLADPSRYYKGGKPDLKLYDAKFASLNPDDKIEMAKAVAEEALGKDERIISVGSSYGDGEDFAYRLISNGFEGETKSTWYSLSADITIRGEGEARPSAYWYESSLYMNDLIKKGIGQKALERVLR-KLGQKKVQSGKYTMVVDPMNSSRLLSPMI-SALNGSALQQKNSFLL-NKLNEKIASDRLTLTDEPHLVKASGARYFDNEGIATERRSIFDKGVLNTYFIDTYNAKKMGVDPTISG----SSILVMETGDKNLDGLIAGVEKGILVTGFNGGN-NNS----STGDFSYGIEGFLIENGKLTQPVSEMNVTGNLITLWN-SLVATGNDPRL------N-----SSWRIPSLVFEGVDF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VPB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109813 for 3247 contacts (-33.8/contact) +
2D Compatibility (PS) -42278 + (NN) -13627 + (LL) 2448
1D Compatibility (HY) -14800 + (ID) 3200
Total energy: -181270.0 ( -55.83 by residue)
QMean score : 0.388
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