Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSILRLDRLRQFIGELATLLDSRPDESTLLAQAHPLLAELVHQDDWLPEDCARPDPQRYQQYLLHVDSRQRFSVVSFVWGPGQITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSDRTSISIHVYGANIGAVRRAVFSAEGEEKPFISGYSNSRLPNIWDLSKENPA
3USS Chain:B ((3-198))
--SILRLDRLRQFIGELATLLDSRPDESTLLAQAHPLLAELVHQDDWLPEDCARPDPQRYQQYLLHVDSRQRFSVVSFVWGPGQITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSDRTSISIHVYGANIGAVRRAVFSAEGEEKPFISGYSNSRLPNIWDLSKE---
General information:
TITO was launched using:
RESULT:
Template:
3USS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89774 for 1460 contacts (-61.5/contact) +
2D Compatibility (PS) -21482 + (NN) -15187 + (LL) 104
1D Compatibility (HY) -24800 + (ID) 9800
Total energy: -160939.0 ( -110.23 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_3USS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3USS-query.scw
PDB file :
Tito_Scwrl_3USS.pdb
: