Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQGSLMLDIGGTWLTAEDRQILRHPEVGGLIIFARNIEHPAQVRELCAAIRAI-RPDLLLAVDQEGGRVQRLRQGFVRLPAMRAIADNPNAEE---LAEHCGWLMATEVQAVGLDLSFAPVLDLDHQRSAVVGSRAFEGDPERAALLAGAFIRGMHAAGMAATGKHFPGHGWAEADSHVAIPEDARSLEEIRRSDLVPFARL--AGQLDALMPAHVIYPQVDPQPAGFSRRWLQEILRGELKFDGVIFSDDLSMAGAHVVGDAASRIEAALAAGCDMGLVCNDRASAELALAALQRLKVTPPSRLQRMRGKG-YANTDYRQQPRWLEALSALRAAQLID |
| 4GVF Chain:B ((2-327)) | --GPVMLNVEGCELDAEEREILAHPLVGGLILFTRNYHDPEQLRELVRQIRAASRNHLVVAVDQEGGRVQRFREGFTRLPAAQSFFALHGLEEGGRLAQEAGWLMASEMIAMDIDISFAPVLDVGHI-SAAIGERSYHADPAKALAMATRFIDGMHDAGMKTTGKHFPGHGAVT-----ETPCDPRPETDIRGKDMSVFRTLISENKLDAIMPAHVIYRAIDPRPASGSPYWLKTVLRQELGFDGVIFSDDLS--------SYAERAQASLDAGCDMILVCNNRKG---AVSVLDNLSPIKAERVTRLYHKGSFSRRELMDSARWKTASAQL------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4GVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -184709 for 2786 contacts (-66.3/contact) +
2D Compatibility (PS) -33848 + (NN) -22893 + (LL) 2520
1D Compatibility (HY) -26400 + (ID) 7900
Total energy: -273230.0 ( -98.07 by residue)
QMean score : 0.536
|
|
|