Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAHKDFTLAPRASGSVSWVETLVISALALGLGWWFSPDDPLQVNATFPWVILAPLLLGMRYGFVRGLASAALLVAALFAFRARGVEAYAQVPAAFIVGVLLCAMLVGEFRDIWERRLERLELANEYRQLRLDEFTRAHHILRISHDRLEQRVAGNDQSLRSSLLGLRQLLRELPGDEAPLDALAETVLALLAQYG-SLRIAGLYRVRYDRTPEPQPLATLGEM--PALDADDLLVRTCLERGELVSVRQELLERG--EQRAHSALQVCVPLVDTDGRILALLAVEQMPFFVFNERTFSLLAILAGHIADLLQSDRRALQLADIDAQRFSQYLKRSLLDARDHGLPACLYAFELTDARYGEEVQRLLEGSQRGLDVQLRLRNDEGRRVLLVLLPLTSAEGSQGYLQRLRILFAERFGQARELESLGVRIRQYELDAGNDRQALGHFLFNECGLNDQQVAI |
| 3KSH Chain:A ((17-160)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------LLKKQAASLIEDEHHMI-AILSNMSALLNDNLDQINWVGFYLLEQNE-L--ILGPFQGHPACVHIPIGKGVCGTAVSERRTQVVADVHQFKGHIACDANSKSEIVVPIFK-DDKIIGVLDIDAPITDRFDDNDKEHLEAIVKIIEKQLA--------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KSH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126510 for 1060 contacts (-119.3/contact) +
2D Compatibility (PS) -14977 + (NN) -6898 + (LL) 25444
1D Compatibility (HY) -3200 + (ID) 1150
Total energy: -127291.0 ( -120.09 by residue)
QMean score : 0.415
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