Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MRLQRGFTLLELLIAIAIFALLALATYRMFDSVMQT----------DQATRVQEQRMRELVRAMGALERDLTQAVERPVRDELGDNRGAFLSEG-----ENDQIVEFTRGGWRNPLGQAR-------------SRLQRVRWSLSGETLERRY-WLVL-----------------------DRAQDSKPR------------VQQVL-------DGVTALSWRFLDKEHNWQGHWPTDEGSEEERLESLPLAVEMTLEHRHYGKLVRV------WRLLDPPLKQDQPQGQPGGENGE-----NGEGGVPQPPEGMPGAPE------------------- |
| 2VHF Chain:A ((1-374)) | GLEIMIGKKKGIQGHYNSCYLDSTLFCLFAFSSVLDTVLLRPKEKNDVEYYSETQELLRTEIVNPLRIYGYVCATKIMKLRKILEKVEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFMEKNVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKLFKKIFPSLELNITDLLEDTPRQCRICGGLAMYECRECYDDPDISAGKIKQFCKTCNTQVHLHPKR--LNHKYNPVSLQNMELFAVLCIETSHYVAFVKYGKDDSAWLFFDSMAGFNIPQVTPCPEVGEYLKMSLEDLHSLDSRRIQGCARRLLCDAYMCMYQSPTMSLYK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VHF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14901 for 1569 contacts (-9.5/contact) +
2D Compatibility (PS) -24569 + (NN) -8123 + (LL) 16
1D Compatibility (HY) -10800 + (ID) 1500
Total energy: -59877.0 ( -38.16 by residue)
QMean score : 0.204
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