Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNVMLITGASRGIGAATALLAAERGYAVVLNYLRNREAAEALRQRIERQGGEALAVAADVAEEGDVERLFASIDERFGRLDVLVNNAGMLEAQTRLENIDAARLHRVFATNVTGSFLCAREAVKRLSTRHGGRGGSIVNVSSMASRLGSPNEYIDYAAAKGAIDSMTIGLAREVAAEGIRVNAVRPGLIDTEIHASG-GEPGRIERLKGGIPLGRGGTAEEVARAILWLASDEASYSTGTFIDVSGGR
1RWB Chain:B ((9-249))
---VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAG-LENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFV--ENDIKGTVINMSSVHEKIPWP-LFVHYAASKGGMKLMTKTLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGG-
General information:
TITO was launched using:
RESULT:
Template:
1RWB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116631 for 2077 contacts (-56.2/contact) +
2D Compatibility (PS) -26342 + (NN) -12644 + (LL) 608
1D Compatibility (HY) -18000 + (ID) 4850
Total energy: -177859.0 ( -85.63 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_1RWB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RWB-query.scw
PDB file :
Tito_Scwrl_1RWB.pdb
: