Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSISISYSTTYSGWTVADYLADWSAYFGDVNHRPGQVVDGSNTGGFNPGPFDGSQYALKSTASDAAFIAGGDLHYTLFSNPSHTLWGKLDSIALGDTLTGGASSGGYALDSQEVSFSNLGLDSPIAQGRDGTVHKVVYGLMSGDSSALQGQIDALLKAVDPSLSINSTFDQLAAAGVAHATPAAAAAEVGVVGVQELPHDLALAA
3MOM Chain:B ((2-183))
-SISISYSTTYSGWTVADYLADWSAYFGDV------VVDGSNTGGFNPGPFDGSQYALKSTASDAAFIAGGDLHYTLFSNPSHTLWGKLDSIALGDTLTGGASSGGYALDSQEVSFSNLGLDSPIAQGRDGTVHKVVYGLMSGDSSALQGQIDALLKAVDPSLSINSTFDQLAAAGVAHATPA----------------------
General information:
TITO was launched using:
RESULT:
Template:
3MOM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113703 for 1434 contacts (-79.3/contact) +
2D Compatibility (PS) -19424 + (NN) -13666 + (LL) 2196
1D Compatibility (HY) -21200 + (ID) 8800
Total energy: -174597.0 ( -121.76 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_3MOM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MOM-query.scw
PDB file :
Tito_Scwrl_3MOM.pdb
: